Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909244.1_cds_XP_016459468.1_52995
CDS Infomation

[gene=LOC107783022] [db_xref=GeneID:107783022] [protein=autophagy-related protein 18d-like] [protein_id=XP_016459468.1] [location=complement(join(14038..14131,14315..14438,14727..14982,17139..17915))] [gbkey=CDS]
Sequence

ATGACTACTCTATCATCCCCAACGAGTTCAACTGTCTCACCATCTCGAGGGACACTTCCA
CCAGCAGCCTATGGGACATATGAATCCCCCATGATCGGGGCCTCTCATTCTGGCCATTCT
GAACCAGAGATCAGTGACAATGATGATACAGAGCTACACTCTGTGTCATGGAATCAGGAT
TACAGTTGCTTTGCTGCTGGCACTAGCCGTGGCTTTCGTGTATATAACTGTGATCCTTTC
AAAGAGACTTTCAGACGTGATCTGAAAAGTGGTGGGTTTGGAATAGTAGAGATGTTGTTC
CGATGCAACATTTTAGCACTTGTCGGTGCCAGGACTAACGCCCAATACCCACCTAATAAA
GTTATTATATGGGATGATCATCAGAGCCGATGCATTGGTGAATTTTCATTTAGGTCTGAC
GTTTGTGCAGTGAAACTAAGACGGGATTGTATTGTTGTAGTCCTTGAGCACAAGATATAT
GTCTACAACTTTATGGATCTGAAGCTTCTTCATCAGATAGAAACTGTGGGCAATCCCAGG
GGACTTTGCTGCCTCTCACACCATTTAAATACATCTGTATTGGCTTGCCCAGGCGTTCGA
AGAGGACAGGTCCGGGCTGAGCATTTTGGCTTGAATATGACAAAGTTGATCAAGGCGCAT
GATTCTCAGATAGCATGTTTAACCTTGACTATGGATGGGCTGCTTCTTGCAACAGCAAGC
ACTCGGGGAACTTTGATAAGACTCTTCAACACCATGGATGGAACTCAGTTGCAAGAGGTG
CGTAGAGGGGTTGACAAAGCAGATATCTATAGTATTGCACTATCACCAAATGTGCAGTGG
TTGGCCGTCTCTAGCGACAAAGGTACCATCCATGTGTACAGCCTAAGAGTACGTGTTGTT
GGCGAGGATGCTGCAGCTGATTCTGCTGTTAGAACTCCAACATTATTGTGTCAAAATTCA
TCAAATTCTCTTGATGCACTTATTTCTCCAAGTACTGGAGCCAACCCTGGTTCATCATTG
TCTTTTATGAAAGGAGTTCTGCCAAAATACTTTAGCTCTGAATGGTCATTTGCTCAGTTT
CACTTGCCAGAATGTACCCAGTACATTGTTGCGTTTGGTTCTCAGAACACTGTTGTTACT
GCTGGCACTGATGGAAGTTTCTATAGGTGCAGCTTTGATCCTGTGAATGGAGGAGAAATG
GTACAGCAGGAATATGTCCGCTTTCTGAAAACAGAGAGTAGGCAGAGATAG

Peptide Sequence

PEP ID

XP_016459468.1
PEP Infomation

PREDICTED: autophagy-related protein 18d-like [Nicotiana tabacum]
Sequence

MTTLSSPTSSTVSPSRGTLPPAAYGTYESPMIGASHSGHSEPEISDNDDTELHSVSWNQD
YSCFAAGTSRGFRVYNCDPFKETFRRDLKSGGFGIVEMLFRCNILALVGARTNAQYPPNK
VIIWDDHQSRCIGEFSFRSDVCAVKLRRDCIVVVLEHKIYVYNFMDLKLLHQIETVGNPR
GLCCLSHHLNTSVLACPGVRRGQVRAEHFGLNMTKLIKAHDSQIACLTLTMDGLLLATAS
TRGTLIRLFNTMDGTQLQEVRRGVDKADIYSIALSPNVQWLAVSSDKGTIHVYSLRVRVV
GEDAAADSAVRTPTLLCQNSSNSLDALISPSTGANPGSSLSFMKGVLPKYFSSEWSFAQF
HLPECTQYIVAFGSQNTVVTAGTDGSFYRCSFDPVNGGEMVQQEYVRFLKTESRQR

Transcript Sequence

Gene sequence data has not been registered.